This web page was produced as an assignment for a course on
Statistical Analysis on Microarray Data at
Organism Homo sapiens
Data gathered on 2006 Nov 16 to 2007 Jul 27
Conditions of samples Tumor (27 arrays) / Normal (7 arrays)
Tissue Types Tumor: ARMS (3), ERMS (1), PRMS (2), DDLPS (1), GIST (8), SS (7), LMS (5)
Below is the table I will be using in R. I am calling that file “toReadIn.txt” (tab delineated).
|
Name |
ExptID |
Experiment |
Order |
TissueType |
DiseaseState |
Cy3 |
Cy5 |
|
array
(01).txt |
71056 |
STT623-GIST
miRNA |
5 |
GIST |
tumor |
UHR |
GIST |
|
array
(02).txt |
71057 |
STT111-GIST
miRNA |
2 |
GIST |
tumor |
UHR |
GIST |
|
array
(03).txt |
71059 |
skeletal
muscle1 miRNA |
32 |
SKM |
normal |
UHR |
SKM |
|
array
(04).txt |
71061 |
STT3705-SS
miRNA |
6 |
SS |
tumor |
UHR |
SS |
|
array
(05).txt |
71062 |
STT2000b-GIST
miRNA |
3 |
GIST |
tumor |
UHR |
GIST |
|
array
(06).txt |
71063 |
STT335b-GIST
miRNA |
4 |
GIST |
tumor |
UHR |
GIST |
|
array
(07).txt |
71068 |
skeletal
muscle miRNA |
33 |
SKM |
normal |
UHR |
SKM |
|
array
(08).txt |
71072 |
STT4612a-LMS
miRNA |
1 |
LMS |
tumor |
UHR |
LMS |
|
array
(09).txt |
71073 |
STT516a-LMS
miRNA |
0 |
LMS |
tumor |
UHR |
LMS |
|
array
(10).txt |
71074 |
STT1739a-SS
miRNA |
7 |
SS |
tumor |
UHR |
SS |
|
array
(11).txt |
71653 |
STT932-ARMS
miRNA |
8 |
ARMS |
tumor |
UHR |
ARMS |
|
array
(12).txt |
71654 |
STT1433-ARMS
miRNA |
9 |
ARMS |
tumor |
UHR |
ARMS |
|
array
(13).txt |
71655 |
STT4728-ERMS
miRNA |
10 |
ERMS |
tumor |
UHR |
ERMS |
|
array
(14).txt |
71656 |
STT110-ARMS
miRNA |
11 |
ARMS |
tumor |
UHR |
ARMS |
|
array
(15).txt |
71657 |
STT4813-PRMS
miRNA |
12 |
PRMS |
tumor |
UHR |
PRMS |
|
array
(16).txt |
71658 |
STT4814-PRMS
miRNA |
13 |
PRMS |
tumor |
UHR |
PRMS |
|
array
(17).txt |
71808 |
TB2798-LMS
miRNA |
14 |
LMS |
tumor |
UHR |
LMS |
|
array
(18).txt |
71813 |
TB5363-SS
miRNA |
16 |
SS |
tumor |
UHR |
SS |
|
array
(19).txt |
71814 |
TB2500-SS
miRNA |
17 |
SS |
tumor |
UHR |
SS |
|
array
(20).txt |
71815 |
TB5321-SS
miRNA |
18 |
SS |
tumor |
UHR |
SS |
|
array
(21).txt |
71816 |
TB40-GIST
miRNA |
19 |
GIST |
tumor |
UHR |
GIST |
|
array
(22).txt |
71817 |
TB5918
DDLPS miRNA |
20 |
DDLPS |
tumor |
UHR |
DDLPS |
|
array
(23).txt |
71818 |
TB1081-GIST
miRNA |
21 |
GIST |
tumor |
UHR |
GIST |
|
array
(24).txt |
71819 |
TB265-GIST
miRNA |
22 |
GIST |
tumor |
UHR |
GIST |
|
array
(25).txt |
71820 |
TB1296GIST
miRNA |
23 |
GIST |
tumor |
UHR |
GIST |
|
array
(26).txt |
71821 |
STT4608c-LMS
miRNA |
24 |
LMS |
tumor |
UHR |
LMS |
|
array
(27).txt |
71822 |
STT-638c-SS
miRNA |
25 |
SS |
tumor |
UHR |
SS |
|
array
(28).txt |
71823 |
STT3217c-SS
miRNA |
26 |
SS |
tumor |
UHR |
SS |
|
array
(29).txt |
71824 |
TB5792a-LMS
miRNA |
15 |
LMS |
tumor |
UHR |
LMS |
|
array
(30).txt |
76166 |
SM_
myometrium1-miRNA |
27 |
SM |
normal |
UHR |
SM |
|
array
(31).txt |
76167 |
SM_
myometrium2-miRNA |
28 |
SM |
normal |
UHR |
SM |
|
array
(32).txt |
76168 |
SM_small
bowel-miRNA |
29 |
SM |
normal |
UHR |
SM |
|
array
(33).txt |
76169 |
SM_stomach-miRNA |
30 |
SM |
normal |
UHR |
SM |
|
array
(34).txt |
76170 |
SM_uterus-miRNA |
31 |
SM |
normal |
UHR |
SM |
This website was designed by Austen Head.
Email: austen
[dot] head [at]