Papers and Publications

 

(links to preprints or journal website)

2011

 

Karnovsky, N.J., *Brown, Z.W., Welcker, J., Harding, A.M.A., Walkusz, W., Cavalcanti, A., Hardin, J., Kitaysky, A., Gabrielsen, G., Grémillet, D. Inter-colony comparison of diving behavior of an Arctic top predator: implications for warming in the Greenland Sea, Marine Ecology Progress Series, 440: 229-240, 2011.  DOI: 10.3354/meps0935.

 

Grosfils, E.B., *Long, S.M., *Venechuk, E.M.,* Hurwitz, D.M., *Richards, J.W., *Kastl, Brian, *Drury, D.E., and Hardin, J., 2011, Geologic map of the Ganiki Planitia quadrangle (V-14), Venus: U.S. Geological Survey Scientific Investigations Map 3121. [http://astrogeology.usgs.gov/Projects/PlanetaryMapping/MapStatus/VenusStatus/V14.html].

 

Head, A., Hardin, J., Adolph, S.  New methods for estimating maximum performance and the correlation of sample measures, Environmental and Ecological Statistics, 2011.

 

2010

 

Richards, J., Hardin, J., Grosfils, E. Weighted Model-Based Clustering for Remote Sensing Image Analysis, Computational Geosciences, 14: 125-136; 2010.

 

2009

 

Hardin, J., Wilson, J. A note on oligonucleotide expression values not being normally distributed, Biostatistics, 10: 446-450; 2009. (full manuscript at Supplementary Material to A note on oligonucleotide expression values not being normally distributed)

 

2008

 

Yiu, G., McCord, A., Wise, A.,  Jindal, R., Hardee, J., Kuo, A., Yuen Shimogawa, M., Cahoon, L., Wu, M., Kloke, J., Hardin, J., Mays Hoopes, L.L.; Pathways Change in Expression During Replicative Aging in Saccharomyces cerevisiae, Journal of Gerontology, 63A: 21-34; 2008.

 

2007

 

Hardin, J., Mitani, A., Hicks, L., VanKoten, B.; A Robust Measure of Correlation Between Two Genes on a Microarray, BMC Bioinformatics, 8:220; 2007. (R code: biwt.r)

 

Adolph, S., and Hardin, J.; Estimating Phenotypic Correlations: Correcting for Bias Due to Intraindividual Variability, Functional Ecology, 21: 178-184; 2007.

 

2006

 

Wise, A., Hardin, J., Hoopes, L.; Yeast Through the Ages: a statistical analysis of genetic changes in aging yeast, Chance, 19, 39-44; 2006.

 

Hardin, J., Hoopes, L., Murphy, R.; Analyzing DNA Microarrays with Undergraduate Statisticians, Proceedings of theSeventh International Conference on Teaching Statistics, 2006.

 

2005

 

Altman, N., Banks, D., Hardwick, J., Roeder, K., Craigmile, P., Hardin, J., and Gupta, M.  The IMS New Researchers' Survival Guide, Institute of Mathematical Statistics; 2005.

 

Hardin, J., Rocke, D.; The Distribution of Robust Distances, Journal of Computational and Graphical Statistics, 14: 1-19; 2005.  (R code: to estimate the MCD – mcd.est.r and to estimate c and m – cm.r.)

 

Hardin, J.; Microarray Data from a Statistician’s Point of View, STATS, 42:4-13; 2005.

 

2004

 

Hardin, J., Waddell, M., Page, D., Zhan, F., Barlogie, B., Crowley, J., Shaughnessy, J.; Evaluation of Multiple Models to Distinguish Closely Related Forms of Disease Using DNA Microarray Data: an Application to Multiple Myeloma,  Statistical Applications in Genetics and Molecular Biology; vol 3, article 10; 2004.

 

Hardin, J., Rocke, D.;  Outlier Detection in the Multiple Cluster Setting Using the Minimum Covariance Determinant Estimator, Computational Statistics and Data Analysis, 44: 625-638; 2004.

 

Pauler, D., Hardin, J., Faulkner, J., Leblanc, M., Crowley, J.; Survival Analysis with Gene Expression Arrays. In Handbook of Statistics 23: Advances in Survival Analysis, eds. N. Balakrishnan and C.R. Rao, Elsevier Science: Amsterdam; 2004.

 

2002

 

Durbin, B., Hardin, J., Hawkins, D., Rocke, D.;  A Variance-Stabilizing Transformation for Gene-Expression Microarray Data; Bioinformatics, 18: S105-S110; 2002.

 

Zhan, F., Hardin, J., Kordsmeier, B., Bumm, K., Zheng, M., Tian, E., Sanderson, R., Yang, Y., Wilson, C., Zangari, M., Anaissie, E., Morris, C., Muwalla, F., van Rhee, F., Fassas, A., Crowley, J., Tricot, G., Barlogie, B., Shaughnessy, J.; Global Gene Expression Profiling of Multiple Myeloma, Monoclonal Gammopathy of Undetermined Significance, and Normal Bone Marrow Plasma Cells; Blood, 99: 1745-1757; 2002.

 

1999-2000

 

Hardin, J.; Multivariate Outlier Detection and Robust Clustering with Minimum Covariance Determinant Estimation and S-Estimation.  Ph.D. thesis, Statistics; University of California, Davis.  2000.

 

Coleman, D., Dong, X., Hardin, J., Rocke, D.M., Woodruff, D.L.; Some Computational Issues in Cluster Analysis with no ŕ priori Metric; Computational Statistics and Data Analysis, 31: 1-11; 1999.